Welcome to Wei’s menu for Neuroimage methods!
This is documentation to give some basic instructions about how to run the volumetric, surface and fMRI analysis with different software packages. I hope this e-book can help you in the beginning of running image analysis
We have:
4 appetizers; Linux system, Neurodata, GitHub and basic statistics for neuroimage
5 main courses; FreeSurfer, FSL, AFNI, SPM and CONN
1 dessert, running analysis on SuperComputer
Menu
Appetizer 1 Linux_system
Appetizer 2 Neuroimage data
Appetizer 3 GitHub
Appetizer 4 Statistics
Drinks Preprocessing
Main course 1 FreeSurfer, ASHS and more
Main course 2 FSL
Main course 3 AFNI
Main course 4 SPM
Main course 5 CONN
Computational Neuroscience
Functional Connectivity
Dessert SuperComputer
“Is what each begins and perfects on himself”
–Thomas carlyle
if you have any questions/suggestions about this menu, please contact me by reclusedavid@gmail.com.